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Table 4 Comparison of SFP prediction in RNA and genomic DNA hybridizations

From: Single-feature polymorphism discovery in the barley transcriptome

  

GeneChip RNA

  

SFPs

nonSFPs

GeneChip gDNA

 

10,504

240,307

SFPs

1,090

114

976

nonSFPs

24,9721

10,390

239,331

Chi-square = 107.28, df = 1, p-value = 3.863e-25

  1. SFP and non-SFP probes in the gene-expression data are in columns, while the genomic data are in rows.