Table 7 The combined numbers of polymorphisms and the mutation rates in the promoters, ORFs and exons of seven genes showing high variation in expression
From: Contribution of transcriptional regulation to natural variations in Arabidopsis
Accession ID/polymophisms | Description | Promoter | ORF | Exon | Promoter | ORF | Exon |
|---|---|---|---|---|---|---|---|
| Â | Â | Five accessions | All accessions | ||||
At1g28210 | Mitochondrial protein (AtJ1), putative | 33 | 23 | 4 | 43 | 32 | 4 |
At2g32930 | CCCH Zn-finger protein | 1 | 2 | 0 | 1 | 3 | 1 |
At2g34290 | Putative protein kinase | 1 | 11 | 11 | 10 | 21 | 21 |
At3g13445 | Transcription initiation factor TFIID-1 (TATA sequence-binding protein 1) | 7 | 2 | 0 | 9 | 3 | 3 |
At4g10160 | Putative RING Zn-finger protein | 7 | 46 | 15 | 16 | 57 | 20 |
At4g39410 | WRKY family transcription factor | 3 | 12 | 0 | 6 | 12 | 6 |
At2g18790 | Phytochrome B (PHYB) photoreceptor | 9 | 10 | 7 | 21 | 82 | 71 |
Total number | Â | 61 | 106 | 37 | 106 | 210 | 126 |
Rate per kb | Â | 8.06 | 6.11 | 4.08 | 14.00 | 12.10 | 13.90 |