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Figure 9 | Genome Biology

Figure 9

From: Fast and systematic genome-wide discovery of conserved regulatory elements using a non-alignment based approach

Figure 9

Distribution of median distances to ATG of all 7-mers, obtained when applying FastCompare to H. sapiens and M. musculus. For each 7-mer, a median distance to ATG was calculated using the positions of matches upstream of H. sapiens genes within the conserved set for this 7-mer. The 8,170 median distances were then binned into 20-bp bins, and the resulting histogram was smoothed using a normal kernel. The median distances for several known binding sites in H. sapiens are also indicated.

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Genome Biology

ISSN: 1474-760X

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