From: Variation in tissue-specific gene expression among natural populations
Source of variance | df | Â | Sum of squares | Â | Fs |
---|---|---|---|---|---|
Among populations | P - 1 | 2 | SS_P | I × T × Σ(popmeans - GM)2 | MS_P/MS_I(P)* |
Among tissues | T - 1 | 2 | SS_T | I × P × Σ(tissuemeans - GM)2 | MS_T/MS_TI(P)†|
Interaction | (P - 1) × (T - 1) | 4 | SS_PT | I × Σ(tissue(population)means - popmeans - tissuemeans + GM)2 | MS_PT/MS_TI(P)‡ |
Among inviduals in population | P(I - 1) | 6 | SS_I(P) | T × Σ(ind(population)means - popmeans)2 |  |
Tissue-by-individual in population | P × (T - 1) × (I-1) | 12 | SS_TI(P) | Σ(samplemean - tissue(population)mean - ind(population)mean + popmean)2 | MS_TI(P)/MS_dye§ |
Dye within individuals | P × T × I × (D - 1) | 27 | SS D(I) |  |  |
Replicate hybridization in dye | P × T × I × D × (H - 1) | 54 |  |  |  |
Spot in replicate hybridization | P × T × I × D × H × (S - 1) | 540 |  |  |  |
Total | P × T × I × D × H × S - 1 | 647 |  |  |  |