| CRM | Known element overlap | Arm | pCRM start | pCRM end | pCRM length | 5' gene | pCRM relative position | 3' gene | pCRM relative position | Conserved sites | Conserved site density | z score | Additional gap/pair-rule gene within 20 kb | pCRM relative position | ||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
 |  |  |  |  |  |  |  |  |  |  | A | A+P | A | A+P |  |  |  |
1 | PCE8050 | h stripes 3/4,6,7 [73] | 3L | 8,622,879 | 8,626,839 | 3,961 | CG6486 | +14646 | h | -7829 | 36 | 62 | 9 | 16 | 20.1 | Â | Â |
2 | PCE8051 | kni upstream [74] | 3L | 20,614,714 | 20,617,020 | 2,307 | kni | -813 | CG13253 | +20716 | 25 | 31 | 11 | 13 | 13.2 | Â | Â |
3 | PCE8052 | nub blastoderm | 2L | 12,604,311 | 12,606,913 | 2,603 | CG15488 | +1653 | nub | -304 | 20 | 33 | 8 | 13 | 11.6 | Â | Â |
4 | PCE8053 | eve stripes 3/7 [75] | 2R | 5,035,493 | 5,037,290 | 1,798 | CG12134 | +3712 | eve | -2433 | 21 | 24 | 12 | 13 | 11.5 | Adam | +5901 |
5 | PCE8054 | hairy stripes 1,5 [73] | 3L | 8,628,846 | 8,631,011 | 2,166 | CG6486 | +20613 | h | -3657 | 17 | 29 | 8 | 13 | 10.5 | Â | Â |
6 | PCE8055 | runt stripe 3 [76] | X | 20,356,848 | 20,360,054 | 3,207 | CG1338 | -9192 | run | -6801 | 17 | 34 | 5 | 11 | 10.3 | Â | Â |
7 | PCE8056 | Â | X | 20,323,964 | 20,326,397 | 2,434 | CG11692 | -12536 | Cyp6v1 | -4186 | 16 | 28 | 7 | 12 | 9.6 | Â | Â |
8 | PCE8057 | hb HZ1.4 [77] | 3R | 4,526,225 | 4,527,991 | 1,767 | hb | -2670 | CG8112 | +1273 | 17 | 21 | 10 | 12 | 9.5 | Â | Â |
9 | PCE8059 | eve stripes 4/6 [78] | 2R | 5,044,597 | 5,046,030 | 1,434 | eve | +4874 | TER94 | -3763 | 15 | 18 | 10 | 13 | 9.0 | Adam | +15005 |
10 | PCE8060 | gt posterior [11] | X | 2,186,709 | 2,189,069 | 2,361 | gt | -974 | tko | +11679 | 18 | 21 | 8 | 9 | 8.9 | Â | Â |
11 | PCE8061 | Â | X | 3,169,806 | 3,172,348 | 2,543 | CG12535 | -17954 | CG14269 | +21857 | 13 | 29 | 5 | 11 | 8.8 | Â | Â |
12 | PCE8063 | CE8021 | 3L | 18,339,914 | 18,341,941 | 2,028 | grim | -86621 | rpr | +5341 | 16 | 20 | 8 | 10 | 8.5 | Â | Â |
13 | PCE8064 | Â | 3R | 6,255,663 | 6,256,945 | 1,283 | CG6345 | -13879 | Cyp12e1 | -3594 | 13 | 17 | 10 | 13 | 8.4 | Â | Â |
14 | PCE8065 | Â | 3R | 4,026,032 | 4,027,816 | 1,785 | grn | -18853 | CG7800 | -15898 | 15 | 19 | 8 | 11 | 8.4 | Â | Â |
15 | PCE8066 | Â | X | 20,348,460 | 20,352,624 | 4,165 | CG1338 | -804 | run | -14231 | 16 | 28 | 4 | 7 | 8.3 | Â | Â |
16 | PCE8067 | ftz upstream [23] | 3R | 2,682,314 | 2,684,591 | 2,278 | Scr | -7972 | ftz | -5455 | 15 | 22 | 7 | 10 | 8.3 | Â | Â |
17 | PCE8068 | Â | X | 18,701,007 | 18,702,700 | 1,694 | CG32541 | +39691 | CG32541 | +39691 | 12 | 22 | 7 | 13 | 8.2 | Â | Â |
18 | PCE8069 | Â | 2R | 17,274,311 | 17,276,017 | 1,707 | CG3380 | -2521 | dve | -11496 | 14 | 19 | 8 | 11 | 8.2 | Â | Â |
19 | PCE8070 | Â | 2L | 7,616,050 | 7,618,366 | 2,317 | CG6739 | +15430 | CG13792 | +19862 | 14 | 23 | 6 | 10 | 8.1 | Â | Â |
20 | PCE8071 | sqz neurogenic | 3R | 14,999,463 | 15,001,552 | 2,090 | sqz | +9504 | CG14282 | -1186 | 12 | 24 | 6 | 11 | 8.0 | nos | +16485 |
21 | PCE8072 | Â | X | 5,674,422 | 5,676,386 | 1,965 | CG3726 | +16870 | CG12728 | -6597 | 11 | 24 | 6 | 12 | 7.8 | Â | Â |
22 | PCE8073 | Â | 2R | 14,903,099 | 14,903,925 | 827 | Toll-7 | +12482 | Obp56i | -27903 | 11 | 11 | 13 | 13 | 7.8 | Â | Â |
23 | PCE8074 | Â | 3R | 23,192,304 | 23,192,750 | 447 | CG13980 | +8073 | side | +40862 | 7 | 8 | 16 | 18 | 7.7 | Â | Â |
24 | PCE8075 | Â | 3R | 10,762,920 | 10,764,750 | 1,831 | CG3837 | +18501 | CG14861 | -75759 | 13 | 19 | 7 | 10 | 7.6 | Â | Â |
25 | PCE8076 | eve stripe 2 [75] | 2R | 5,038,454 | 5,039,041 | 588 | CG12134 | +6673 | eve | -682 | 8 | 10 | 14 | 17 | 7.6 | Adam | +8862 |
26 | PCE8077 | Â | 2L | 13,541,662 | 13,542,651 | 990 | kuz | +9371 | kuz | +9371 | 11 | 13 | 11 | 13 | 7.6 | Â | Â |
27 | PCE8078 | Â | 2L | 14,424,056 | 14,425,158 | 1,103 | BG:DS06238.4 | -16773 | BG:DS08340.1 | +7810 | 12 | 13 | 11 | 12 | 7.6 | Â | Â |
28 | PCE8080 | odd stripes 3/6 | 2L | 3,601,045 | 3,602,748 | 1,704 | odd | -1728 | Dot | -9112 | 12 | 19 | 7 | 11 | 7.5 | Â | Â |
29 | PCE8081 | Â | 3L | 17,412,324 | 17,413,414 | 1,091 | CG18265 | +24035 | CG7603 | -1413 | 11 | 14 | 10 | 13 | 7.5 | Â | Â |
30 | PCE8083 | Â | 3L | 14,121,556 | 14,123,127 | 1,572 | Sox21b | -41352 | D | +4373 | 12 | 17 | 8 | 11 | 7.3 | Â | Â |
31 | PCE8084 | Â | 2L | 4,098,489 | 4,099,006 | 518 | ed | +74542 | ed | +74542 | 7 | 9 | 14 | 17 | 7.3 | Â | Â |
32 | PCE8085 | Â | 2R | 12,253,766 | 12,255,302 | 1,537 | CG10953 | -23540 | CG10950 | -3625 | 13 | 15 | 8 | 10 | 7.2 | Â | Â |
33 | PCE8086 | Â | 3L | 20,612,647 | 20,614,073 | 1,427 | kni | +1254 | CG13253 | +23663 | 11 | 17 | 8 | 12 | 7.2 | Â | Â |
34 | PCE8087 | Â | 2R | 3,391,037 | 3,391,561 | 525 | CG30358 | +10444 | CG14755 | -16724 | 7 | 9 | 13 | 17 | 7.2 | Â | Â |
35 | PCE8088 | Â | 3L | 16,418,107 | 16,418,469 | 363 | CG33158 | +49435 | argos | +14111 | 6 | 6 | 17 | 17 | 7.2 | Â | Â |
36 | PCE8089 | Â | 3R | 12,368,159 | 12,368,687 | 529 | CG11769 | +28970 | CG31448 | -670 | 7 | 9 | 13 | 17 | 7.2 | CG14889 | -13735 |
37 | PCE8091 | Â | 3L | 11,213,064 | 11,213,664 | 601 | scylla | +3224 | CG32083 | +24695 | 8 | 9 | 13 | 15 | 7.1 | Â | Â |
38 | PCE8092 | Â | 2L | 1,233,357 | 1,235,228 | 1,872 | CG5156 | +3715 | CG5397 | -6475 | 9 | 23 | 5 | 12 | 7.1 | Â | Â |
39 | PCE8093 | Â | 3L | 15,688,222 | 15,691,204 | 2,983 | comm | -10920 | CG13445 | -67172 | 13 | 22 | 4 | 7 | 7.0 | Â | Â |
40 | PCE8094 | Â | 2R | 10,492,861 | 10,493,546 | 686 | CG30472 | -5321 | CG12959 | -26488 | 9 | 9 | 13 | 13 | 7.0 | Â | Â |
41 | PCE8095 | Â | 3R | 23,894,562 | 23,895,459 | 898 | CG12870 | +31901 | CG12870 | +31901 | 10 | 11 | 11 | 12 | 7.0 | Â | Â |
42 | PCE8096 | Â | 3L | 6,762,543 | 6,765,157 | 2,615 | vvl | +12855 | Prat2 | +108336 | 13 | 20 | 5 | 8 | 6.9 | Â | Â |
43 | PCE8097 | Â | 3R | 10,238,130 | 10,238,652 | 523 | CG14846 | -1983 | CG14847 | +4557 | 7 | 8 | 13 | 15 | 6.8 | Â | Â |
44 | PCE8099 | Â | 2L | 18,305,051 | 18,306,251 | 1,201 | Fas3 | +6868 | Fas3 | +6868 | 10 | 14 | 8 | 12 | 6.7 | Â | Â |
45 | PCE8100 | eve early APR [79] | 2R | 5,042,174 | 5,042,884 | 711 | eve | +2451 | TER94 | -6909 | 8 | 10 | 11 | 14 | 6.7 | Adam | +12582 |
46 | PCE8102 | tll posterior [80] | 3R | 26,663,942 | 26,665,204 | 1,263 | CG15544 | +21005 | tll | -2251 | 11 | 13 | 9 | 10 | 6.6 | Â | Â |
47 | PCE8104 | ems neurogenic [81] | 3R | 9,723,602 | 9,724,936 | 1,335 | E5 | -23682 | ems | -2663 | 12 | 12 | 9 | 9 | 6.6 | Â | Â |
48 | PCE8105 | Â | 3R | 17,817,909 | 17,818,791 | 883 | Eip93F | +25598 | Eip93F | +25598 | 9 | 11 | 10 | 12 | 6.6 | Â | Â |
49 | PCE8106 | Â | 3L | 10,499,018 | 10,501,551 | 2,534 | CG32062 | +25485 | CG32062 | +25485 | 11 | 21 | 4 | 8 | 6.6 | Â | Â |
50 | PCE8107 | Â | 3L | 4,612,891 | 4,614,005 | 1,115 | CG13716 | -161 | CG13715 | +1681 | 11 | 11 | 10 | 10 | 6.6 | Â | Â |
51 | PCE8108 | Â | 2L | 14,403,771 | 14,404,937 | 1,167 | CG15284 | -4301 | BG:DS06238.4 | +2346 | 10 | 13 | 9 | 11 | 6.5 | Â | Â |
52 | PCE8109 | Â | 3R | 7,941,601 | 7,942,426 | 826 | CG31361 | +17775 | CG4702 | +11512 | 9 | 10 | 11 | 12 | 6.5 | Â | Â |
53 | PCE8110 | Â | 2L | 8,804,166 | 8,805,336 | 1,171 | CG9468 | -30684 | SoxN | -12519 | 10 | 13 | 9 | 11 | 6.5 | Â | Â |
54 | PCE8111 | Â | 3L | 8,612,337 | 8,613,016 | 680 | CG6486 | +4104 | h | -21652 | 8 | 9 | 12 | 13 | 6.5 | Â | Â |
55 | PCE8112 | Â | 3L | 4,377,989 | 4,379,208 | 1,220 | CG7447 | +13842 | Syx17 | -3984 | 11 | 12 | 9 | 10 | 6.5 | Â | Â |
56 | PCE8113 | Â | 2L | 14,113,291 | 14,113,893 | 603 | CG15292 | -3974 | CG31768 | -6693 | 7 | 9 | 12 | 15 | 6.5 | Â | Â |
57 | PCE8114 | Â | 3L | 3,997,600 | 3,998,923 | 1,324 | CG14985 | +13500 | fd64A | -799 | 11 | 13 | 8 | 10 | 6.5 | Â | Â |
58 | PCE8115 | eve stripe 1 [79] | 2R | 5,046,559 | 5,047,297 | 739 | eve | +6836 | TER94 | -2496 | 8 | 10 | 11 | 14 | 6.5 | Adam | +16967 |
59 | PCE8116 | Â | 2R | 16,921,501 | 16,922,240 | 740 | CG13493 | -11091 | PpN58A | +4194 | 8 | 10 | 11 | 14 | 6.5 | Â | Â |
60 | PCE8118 | Â | 3R | 14,822,848 | 14,823,484 | 637 | gukh | +13085 | gukh | +13085 | 8 | 8 | 13 | 13 | 6.4 | Â | Â |
61 | PCE8119 | Â | 3R | 12,671,525 | 12,672,987 | 1,463 | abd-A | -15737 | CG10349 | -32477 | 11 | 14 | 8 | 10 | 6.4 | Â | Â |
62 | PCE8120 | Â | 3L | 10,492,688 | 10,495,539 | 2,852 | CG32062 | +19155 | CG32062 | +19155 | 10 | 23 | 4 | 8 | 6.4 | Â | Â |
63 | PCE8121 | Â | 2L | 16,841,696 | 16,842,392 | 697 | CG6012 | -2193 | CG31781 | -5178 | 8 | 9 | 11 | 13 | 6.4 | Â | Â |
64 | PCE8122 | Â | 3L | 6,885,832 | 6,887,436 | 1,605 | Prat2 | -11445 | CG14820 | -5022 | 11 | 15 | 7 | 9 | 6.4 | Â | Â |
65 | PCE8123 | Â | 2L | 15,162,778 | 15,164,524 | 1,747 | BG:DS03192.2 | -6373 | BG:DS07295.1 | +59479 | 11 | 16 | 6 | 9 | 6.4 | Â | Â |
66 | PCE8124 | Â | 2R | 6,888,483 | 6,889,700 | 1,218 | CG12443 | +13963 | CG13192 | -428 | 10 | 13 | 8 | 11 | 6.4 | Â | Â |
67 | PCE8125 | Â | 2L | 20,466,022 | 20,467,708 | 1,687 | CG2493 | -32831 | CG15476 | +4184 | 10 | 17 | 6 | 10 | 6.4 | Â | Â |
68 | PCE8126 | Â | 3L | 2,779,198 | 2,779,658 | 461 | CG2083 | +1101 | CG2083 | +1101 | 6 | 7 | 13 | 15 | 6.3 | Â | Â |
69 | PCE8127 | Â | X | 4,630,473 | 4,632,106 | 1,634 | CG12681 | +14179 | CG15470 | -3196 | 9 | 18 | 6 | 11 | 6.3 | Â | Â |
70 | PCE8128 | Â | 3R | 27,713,381 | 27,715,087 | 1,707 | heph | +35171 | heph | +35171 | 10 | 17 | 6 | 10 | 6.3 | Â | Â |
71 | PCE8130 | Â | 3R | 12,383,752 | 12,385,269 | 1,518 | CG14889 | +1858 | CG14889 | +1858 | 11 | 14 | 7 | 9 | 6.3 | Â | Â |
72 | PCE8131 | Â | 3R | 21,329,716 | 21,331,058 | 1,343 | CG5111 | +8355 | msi | -2351 | 8 | 17 | 6 | 13 | 6.3 | Â | Â |
73 | PCE8132 | Â | 3R | 16,242,660 | 16,243,128 | 469 | CG10881 | +8657 | CG17208 | +20535 | 6 | 7 | 13 | 15 | 6.3 | Â | Â |
74 | PCE8133 | Â | 3R | 24,120,296 | 24,122,240 | 1,945 | CG12516 | -668 | larp | +19112 | 12 | 15 | 6 | 8 | 6.2 | Â | Â |
75 | PCE8134 | Â | 3L | 8,733,754 | 8,734,394 | 641 | CG32030 | +8601 | CG32030 | +8601 | 7 | 9 | 11 | 14 | 6.2 | Â | Â |