Table 1 Examples of class relevance evaluation
From: GOToolBox: functional analysis of gene datasets based on Gene Ontology
Original class annotations | Most relevant term among class annotations | Associated probability | Number of proteins in the class | Number of class proteins annotated for the term | Number of proteins annotated for the term in the reference set |
|---|---|---|---|---|---|
Conjugation with cellular fusion; perception of abiotic stimulus; cell surface receptor linked signal transduction; sensory perception; response to pheromone during conjugation with cellular fusion | Conjugation with cellular fusion | 3.85E-09 | 11 | 8 | 32 |
RNA metabolism | RNA metabolism | 2.76E-09 | 32 | 17 | 70 |
Cell cycle | Cell cycle | 0.07383 | 6 | 3 | 115 |