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Table 4 Genes used to drive cis analysis

From: Genome-wide patterns of carbon and nitrogen regulation of gene expression validate the combined carbon and nitrogen (CN)-signaling hypothesis in plants

Gene

Enzyme

Class

  

C

N

CN

C+N

(a) Genes from pathways that are over-represented in Model 3 CN enhanced

At2g27510

Ferredoxin

1

0

2

1

At1g30510

Ferredoxin-NADP+ reductase

1

0

2

1

At4g05390

Ferredoxin-NADP+ reductase

2

1

3

2

(b) Genes involved in protein synthesis were also used to drive the cis analysis

At1g07070

60S Ribosomal protein L35a

1

0

2

1

At2g36620

60S Ribosomal protein L24

1

0

2

1

At5g07090

40S Ribosomal protein S4

1

0

2

1

At5g58420

40S Ribosomal protein S4

1

0

2

1

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Genome Biology

ISSN: 1474-760X

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