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Table 6 Candidate binding sites for the molybdate regulator ModE

From: Reconstruction of regulatory and metabolic pathways in metal-reducing δ-proteobacteria

Gene

Operon

Function

Site

Position*

Score

Geobacter sulfurreducens PCA

383279

modDABC

Molybdate transport

ATCGTTATgTcaTgAAggtTATAGCGtT

-158

5.16

Desulfovibrio vulgaris

209110

modA

Molybdate transport

CGGTCACG-[N 14 ]-gGTGACCG

-131

5.56

209114

modBC

Molybdate transport

CGGTCACc-[N 14 ]-CGTGACCa

-218

5.38

Desulfovibrio desulfuricans

393254

modAB2-393256

Molybdate transport, ?

CtGTCACG-[N 14 ]-CGTGACCG

-183

5.56

393587

modAB1-modC

Molybdate transport

ttGTCACG-[N 14 ]-CGTGACCG

-119

5.38

  1. *Positionrelative to the start of translation. Lower case letters represent positions that do not conform to the consensus sequence.