Method | Number of links between SWISS-PROT annotated proteins | Keyword recovery % | Maximum false positive fraction | Keyword recovery of random links (100 trials) % | Random links SD % | Keyword recovery signal to noise |
---|---|---|---|---|---|---|
0 bp Operon | 308 | 51 | 0.25 | 5.6 | 1 | 9.1 |
25 bp Operon | 642 | 49 | 0.28 | 5.6 | 0.7 | 8.8 |
50 bp Operon | 818 | 47 | 0.31 | 5.7 | 0.6 | 8.2 |
75 bp Operon | 912 | 44 | 0.36 | 5.5 | 0.5 | 8 |
100 bp Operon | 1044 | 45 | 0.35 | 5.7 | 0.5 | 7.9 |
100 bp Operon and RS | 88 | 67 | 0.05 | 5.5 | 1.8 | 12 |
100 bp Operon and GN | 638 | 60 | 0.16 | 5.5 | 0.7 | 11 |
100 bp Operon and PP | 268 | 62 | 0.11 | 5.8 | 0.9 | 11 |
100 bp Operon, PP and GN | 242 | 61 | 0.11 | 5.6 | 1.2 | 11 |
100 bp Operon, PP and RS | 62 | 74 | 0.03 | 5.6 | 2 | 13 |
100 bp Operon, RS and GN | 78 | 65 | 0.05 | 6.3 | 1.9 | 10 |
All four methods | 54 | 70 | 0.04 | 5.7 | 2.3 | 12 |