Reinvestigation of the Saccharomyces cerevisiae genome annotation by comparison to the genome of a related fungus: Ashbya gossypii

Table 1 Novel S. cerevisiae ORFs identified by homology and synteny to A. gossypii ORFs

A. gossypii ORF		Novel S. cerevisiae ORF(s)		% Similarity	Homologs*
Name	Size	Name(s)	Size(s)		Hemiascomycetes	C. albicans	S. pombe	N. crassa
AGL322W	57	YBL039W-A	59	53.70	x
ADL343C	99	YBR111W-A	98	65.28	x	x
AAL005W	72	YCL005W-A	73	79.17	x	x		x
AFR743C-A	132	YCL058W-A	132	45.00	x
AER271W	81	YCR075W-A/YNR034W-A^†	75/99	44.00/46.15	x
ACL158W	95	YDL160C-A	80	55.70	x
AGR097W-A	66	YER180C-A	85	83.70	x
AFR298C	73	YIL156W-B	73	71.23	x	x	x
AFL216C	49	YJL127C-B	52	61.22	x	x
AAL130W	93	YJR005C-A/YGR169C-A^†	92/93	74.44/50.82	x	x
ABR148C-A	117	YJR112W-A	109	56.44	x	x		x
ABR099W-A	73	YKL068W-A	78	33.33	x
AFR204W	68	YKL138C-A	68	57.35	x
AFR289W	81	YKR095W-A	83	58.75	x	x	x
ADL036W-A	75	YLR307C-A	87	50.00
AFL165W	94	YMR194C-B	73	51.47	x	x	x	x
ADL210W	72	YNL024C-A	72	81.94	x	x	x	x
AFR059W	84	YNL138W-A	85	52.38	x
AAR108W-A	70	YOR020W-A	90	35.71	x	x
ABR192C-A	71	YPL096C-A	68	45.59	x
AFL069C	58	YPL189C-A	68	69.64	x	x
ACR178C	65	YPR036W-A	67	51.06	x	x
AEL262C-A	86	YPR170W-B	85	85.88	x	x		x

*x indicates that a homolog to the novel ORF was found in the hemiascomycete, C. albicans, S. pombe or N. crassa databases. ^†Novel cases of gene duplication with homology to a single A. gossypii gene, remnant from the postulated genome doubling in the S. cerevisiae lineage [12, 13].

ISSN: 1474-760X