Name | Original | First screen | Second screen | Final candidates |
WMi | 1,799 | 16 (0.889%) | 12 (0.667%) | 12 (0.667%) |
WMj | 3,119 | 11 (0.353%) | 7 (0.224%) | 7 (0.224%) |
NMi | 12,841 | 99 (0.771%) | 27 (0.210%) | 5 (0.038%) |
NMj | 5,630 | 54 (0.959%) | 16 (0.284%) | 6 (0.107%) |
NMh | 6,514 | 4 (0.061%) | 0 (0.00%) | 0 (0.00%) |
- Clustered ESTs (W) were from the Parasitic Nematode Sequencing Project at Washington University. Raw ESTs (N) were extracted from NCBI's GenBank. Mi, Meloidogyne incognita; Mj, M. javanica; Mh, M. hapla. 'Original number' gives the size of the initial dataset. For both screens, matches were declared when e-values were less than 1.0e-10. The percentage of the original number of sequences remaining after each screen is listed in parentheses. 'Final candidates' reflects total number of candidates after removal of redundancy.