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Table 2 Comparison of lengths of cDNA alignments for the 5,016 cDNA sequences

From: Full-length messenger RNA sequences greatly improve genome annotation

 

gap2

est_genome

GeneSeqer

sim4

32/34

6/652

31/67

gap2

 

2/708

3/50

est_genome

706/708

 

706/733

  1. Entries show the number of sequences for which the program listed along the top produced a longer alignment than the program listed on the left; for example, the entry 32/34 indicates that gap2 produced a longer alignment in 32 cases out of the total 34 for which sim4 and gap2 had alignments of different lengths.