(a) Altered genes within the chronic alcohol withdrawal QTL on proximal chromosome 1 | ||||||
---|---|---|---|---|---|---|
 | Gene | In silico percent coverage* | Amino-acid variations | |||
Symbol | Gene ID | Location | B6 | D2 | Both | Â |
 | mCG55019 | 30,510,903 - 30,520,321 | 100 | 100 | 100 | M72V†|
 | mCG52566 | 31,637,483 - 31,666,730 | 95 | 95 | 95 | S6A |
 | mCG49360 | 32,140,873 - 32,141,648 | 100 | 87 | 87 | P74L†, C123R†|
 | mCG66997 | 36,796,676 - 36,805,521 | 100 | 100 | 100 | stop61Y |
 | mCG4911 | 39,571,491 - 39,572,134 | 54 | 100 | 54 | R74H, E79D |
Slc5a7 | NM_022025 | Uncertain | 100 | 99 (100) | 99 (100) | R38H†|
(b) Altered genes within the sex-limited chronic alcohol withdrawal QTL on chromosome 13 | ||||||
 | Gene | In silico percent coverage* | Amino-acid variations | |||
Symbol | Gene ID | Location | B6 | D2 | Both | Â |
 | mCG22018 | 54,248,540 - 54,266,542 | 100 | 86 | 86 | I155F |
Ptch | mCG21490 | 54,702,052 - 54,733,739 | 79 | 68 | 68 | T1267N |
 | mCG67381 | 54,910,868 - 54,921,322 | 95 | 95 | 95 | N48D |
 | mCG49128 | 55,141,914 - 55,156 036 | 82 | 100 | 82 | S38G, H96R |
Hsd17b3 | NM_008291 | 55,258,374 - 55,287,747 | 69 (100) | 61 (100) | 45 (100) | C95R†|
 | mCG67239 | 55,349,545 - 55,350,013 | 100 | 100 | 100 | T47M, P124R‡ |
Habp4 | NM_019986 | 55,358,811 - 55,383,494 | 89 (96) | 90 (96) | 84 (96) | A65-(in/del)†, P187L†, A266T†|
 | mCG65010 | 55,397,330 - 55,399,305 | 84 | 100 | 84 | S48N†, R76W†|
 | mCG51118 | 55,652,165 - 55,652,438 | 31 | 100 | 31 | F6L‡ |
 | mCG50935 | 55,841,328 - 55,842,516 | 100 | 100 | 100 | A210V |
 | mCG50411 | 56,005,687 - 56,054,181 | 100 | 66 | 66 | G200E†|
 | mCG55714 | 56,067,926 - 56,074,495 | 96 | 90 | 90 | S99P‡, L361S‡, Q557R‡, A851V‡ |
 | mCG59053 | 56,106,754 - 56,107,033 | 84 | 100 | 84 | S64G‡ |
 | mCG59052 | 56,122,823 - 56,169,063 | 93 | 86 | 79 | W53R, M62V, T17I, V197A, T198P, A324S, D645N, R728G, W846R†|
Nrif-2 | AJ319726 | 56,376,102 - 56,425,620 | 96 (100) | 78 (100) | 74 (100) | A491T†, Q593R†, I679V†|
Ptdss1 | mCG67987 | 57,190,261 - 57,251,587 | 100 | 89 | 89 | G322C†|
 | mCG67995 | 57,426,346 - 57,427,146 | 100 | 83 | 83 | G4E |
 | mCG67997 | 57,732,668 - 57,740,675 | 53 (100) | 100 | 53 (100) | K24T†, L30R†, S36P†, I48S†, K62R†, V89E†, N94T†|
Srd5a1 | mCG7698 | 58,982,812 - 59,009,801 | 78 (100) | 78 (100) | 78 (100) | R7C†, V142I†, E176D†|