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Fig. 6 | Genome Biology

Fig. 6

From: Measuring, visualizing, and diagnosing reference bias with biastools

Fig. 6

Biastools called bias region of HG002 with two different method. The tracks from top down are: combined Z-score for direct-to-GRC alignment, combined Z-score for Leviosam2 alignment, IGV read arrangement of direct alignment, read arrangement of Leviosam2, “Biased region” of direct alignment, “Biased region” of Leviosam2. Combined Z scores include read depth, variant density, and non-diploid variant. The scores above 10 are truncated in the panel to show the details between 0 and 10. Note that the read coverage tracks use different scales. For direct alignment, the track ranges from 0 to 254, while that of Leviosam2 ranges from 0 to 60

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